# References cited in the Introduction to Realistic Neural Modeling with GENESIS

Blackwell KT (2005). Modeling Calcium Concentration and Biochemical Reactions. Brains, Minds, and Media, Vol.1, bmm224 (urn:nbn:de:0009-3-2245). [Viewable at http://www.brains-minds-media.org/archive/224]

Bower, JM (2005) Looking for Newton: Realistic modeling in modern biology Brains, Minds and Media 1:bmm217 (http://www.brains-minds-media.org/) [Viewable at http://www.brains-minds-media.org/archive/217]

Bower, J.M. and Beeman, D. (1998). The Book of GENESIS: Exploring Realistic Neural Models with the GEneral NEural SImulation System, second edn. Springer-Verlag, New York. [View book index and links to chapters]

Brette R, Rudolph M, Carnevale T, Hines M, Beeman D, Bower JM, Diesmann M, Morrison A, Goodman PH, Harris Jr FC, Zirpe M, Natschlager T, Pecevski D, Ermentrout B, Djurfeldt M, Lansner A, Rochel O, Vieville T, Muller E, Davison AP, El Boustani S, and Destexhe A (2007). Simulation of networks of spiking neurons: a review of tools and strategies. J. Comput. Neurosci. 23: 349-398.

Hereld, M. Stevens, R. L., Teller, J. and van Drongelen, W. (2005) Large Neural Simulations on Large Parallel Computers. Int. J. Bioelectromag. 7:44-46.

Hodgkin, A. and Huxley, A. (1952). A quantitative description of membrane current and its application to conduction and excitation in nerve. J. Physiol. (London) 117:500-544.

Nenadic, Z., Ghosh, B. K. and Ulinski. P. (2003) Propagating Waves in Visual Cortex: A Large Scale Model of Turtle Visual Cortex. J. Computat. Neurosci. 14:161-184.

Nowak, L.G., Azouz, R., Sanchez-Vives,M.V., Gray, C.M., and McCormick, D.A. (2003) Electrophysiological classes of cat primary visual cortical neurons in vivo as revealed by quantitative analyses. J. Neurophysiol. 89: 1541-1566.

Shepherd G (2004) The Synaptic Organization of the Brain, 5th edition, Oxford University Press, NY.

van Drongelen, W., Koch, H., Elsen, F., Lee, H., Mrejeru, A., Doren, E., Marcuccilli, C., Hereld, M., Stevens, R. and Ramirez, J-M. (2006) Role of Persistent Sodium Current in Bursting Activity of Mouse Neocortical Networks In Vitro. J. Neurophysiol. 96:2564-2577.

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